Structure of PDB 6jg9 Chain B Binding Site BS01

Receptor Information
>6jg9 Chain B (length=390) Species: 66797 (Spbetavirus SPbeta) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MELIRIAMKKDLENDNSLMNKWATVAGLKNPNPLYDFLNHDGKTFNEFSS
IVNIVKSQYPDREYELMKDYCLNLDVKTKAARSALEYADANMFFEIEDVL
IDSMISCSNMKSKEYGKVYKIHRELSNSVITEFEAVKRLGKLNIKTPEMN
SFSRLLLLYHYLSTGNFSPMAQLIKQIDLSEISENMYIRNTYQTRVHVLM
SNIKLNENSLEECREYSKKALESTNILRFQVFSYLTIGNSLLFSNYELAQ
ENFLKGLSISVQNENYNMIFQQALCFLNNVWRKENKWINFESDSIMDLQE
QAHCFINFNENSKAKEVLDKLDLLVHNDNELAMHYYLKGRLEQNKACFYS
SIEYFKKSNDKFLIRLPLLELQKMGENQKLLELLLLLEHH
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6jg9 Structural insights into DNA recognition by AimR of the arbitrium communication system in the SPbeta phage.
Resolution1.998 Å
Binding residue
(original residue number in PDB)
Y159 F167 V198 N202 R228 F232 N239 A273 F276 M296 Q299 E300 N329 D360
Binding residue
(residue number reindexed from 1)
Y159 F167 V198 N202 R228 F232 N239 A273 F276 M296 Q299 E300 N329 D360
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0098689 latency-replication decision

View graph for
Biological Process
External links
PDB RCSB:6jg9, PDBe:6jg9, PDBj:6jg9
PDBsum6jg9
PubMed31149347
UniProtO64094|AIMR_BPSPB AimR transcriptional regulator (Gene Name=aimR)

[Back to BioLiP]