Structure of PDB 6jew Chain B Binding Site BS01

Receptor Information
>6jew Chain B (length=169) Species: 1409923 (Acinetobacter baumannii MRSN 3527) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LLPILSFPDPRLRTIAKPVEEVTDEIRQLAADMFETMYAAPGIGLAASQV
DRHIQLIVMDLSESKDEPMVFINPKVTPLTTQPYEEGCLSVPQIYDKVDR
PSRVKIEAINLEGQAFEIEADGLLAVCIQHEMDHLNGKLFVDYLSPLKRQ
RAREKVEKIVRQREREKVA
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6jew Chain B Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6jew K3U bound crystal peptide deformylase from Acinetobacter baumanii
Resolution2.0 Å
Binding residue
(original residue number in PDB)		C92 H134 H138
Binding residue
(residue number reindexed from 1)		C88 H130 H134
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) G46 Q51 C92 L93 H134 E135 H138
Catalytic site (residue number reindexed from 1) G44 Q49 C88 L89 H130 E131 H134
Enzyme Commision number 3.5.1.88: peptide deformylase.
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0042586 peptide deformylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0018206 peptidyl-methionine modification

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Molecular Function
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Biological Process
External links
PDB RCSB:6jew, PDBe:6jew, PDBj:6jew
PDBsum6jew
PubMed
UniProtB0VNL8|DEF_ACIBS Peptide deformylase (Gene Name=def)

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