Structure of PDB 6j6t Chain B Binding Site BS01

Receptor Information
>6j6t Chain B (length=356) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ATSSTAVGFDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRC
LPINAREITKQELQMVHTSEHVDAVDTTSQLLYSYFTSDTYANEYSARAA
RLAAGLCADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCLHNNAAVA
ALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYP
GTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPD
FVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYN
LRSISASATAVIKVLLGEATTPSVAGLQTVLDVLNIQLEFWPSLAISYSK
LLSELE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6j6t Chain B Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6j6t Structure of Arabidopsis HISTONE DEACETYLASE15.
Resolution2.36 Å
Binding residue
(original residue number in PDB)
D313 H315 D404
Binding residue
(residue number reindexed from 1)
D168 H170 D259
Annotation score1
Enzymatic activity
Enzyme Commision number 3.5.1.98: histone deacetylase.
External links
PDB RCSB:6j6t, PDBe:6j6t, PDBj:6j6t
PDBsum6j6t
PubMed32878973
UniProtQ8GXJ1|HDA15_ARATH Histone deacetylase 15 (Gene Name=HDA15)

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