Structure of PDB 6iv7 Chain B Binding Site BS01
Receptor Information
>6iv7 Chain B (length=386) Species:
332952
(Aspergillus flavus NRRL3357) [
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ETVAAIKTLIQQLAQSTDQFGRAEINDALRELQYSLETPFDTVMRMSLDT
CQVAVARIGSDLGLFKHLSQCASPQSAEELADHLGCGRELMSRLLRYMAS
VRMVQQTDDIKYISSNITQTLAVPGLEAGMRHAFENLWPVLMALPDFLAE
RKYPDIVDAKDTAFQKAFNTDQDCFHWLATQPTRIANFKVLLTDERTPNF
LSTFPLEKELGSWSAEPEKALFVDIGGGMGHACIRLREKYPNQPGRVILQ
DLPPVLQAAQATLPLSGIESMPHNFHTPQPVQGAKFYFLRLILRDFPDHQ
ALEILQNIVPAMDAESRIVIDDGVPPEKGARWAETGTDICIMSALGSKER
TQRQWEELAAKAGLQLQALYQYTWPVVNAAMVFSLQ
Ligand information
Ligand ID
SAH
InChI
InChI=1S/C14H20N6O5S/c15-6(14(23)24)1-2-26-3-7-9(21)10(22)13(25-7)20-5-19-8-11(16)17-4-18-12(8)20/h4-7,9-10,13,21-22H,1-3,15H2,(H,23,24)(H2,16,17,18)/t6-,7+,9+,10+,13+/m0/s1
InChIKey
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
SMILES
Software
SMILES
CACTVS 3.341
N[CH](CCSC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)C(O)=O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CSCCC(C(=O)O)N)O)O)N
CACTVS 3.341
N[C@@H](CCSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)C(O)=O
ACDLabs 10.04
O=C(O)C(N)CCSCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CSCC[C@@H](C(=O)O)N)O)O)N
Formula
C14 H20 N6 O5 S
Name
S-ADENOSYL-L-HOMOCYSTEINE
ChEMBL
CHEMBL418052
DrugBank
DB01752
ZINC
ZINC000004228232
PDB chain
6iv7 Chain B Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
6iv7
The crystal structure of A SAM-Dependent enzyme from Aspergillus flavus
Resolution
1.937 Å
Binding residue
(original residue number in PDB)
L193 G227 D252 H274 N275 F276 R291
Binding residue
(residue number reindexed from 1)
L192 G226 D251 H273 N274 F275 R290
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.1.1.-
Gene Ontology
Molecular Function
GO:0008168
methyltransferase activity
GO:0008171
O-methyltransferase activity
Biological Process
GO:0009058
biosynthetic process
GO:0032259
methylation
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:6iv7
,
PDBe:6iv7
,
PDBj:6iv7
PDBsum
6iv7
PubMed
UniProt
B8NJH3
|LEPI_ASPFN O-methyltransferase lepI (Gene Name=lepI)
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