Structure of PDB 6hq8 Chain B Binding Site BS01

Receptor Information

>6hq8 Chain B (length=1138) Species: 256318 (metagenome) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SITMDMVSMNGEMFYKIANNDAMRPFFMTIVSDSNHWMFVSSNGGLTAGR
KNAEYALFPYYTDDKITESADITGSKSIFQIQYNNELIVWEPFSERFTNK
FKITRNLYKNYYGNKIIFEEINEDLGLTYRYQWCSSNQFGFVRKSELSNH
SKNVYEISLLDGIQNIMPYGVSSDLQSSTSNLVDAYKRSELHPKSGLGIF
ALSAIIVDKAEPSEALKANIAWSLGLNNPKYLVSSLQLNHFRNGKSISPE
DDIKGEKGAYFLNTVMTLEANTQKEWMIIANVNQDHSDIIAITETIQNNK
KIAEDINTDIELGTKRLIELNASSDALQLTADNLRDTRHFSNTLFNIMRG
GIFDNNYQIEKGDFSNYIKKANKLVFDKIDLNALGEIFSLNDLNEFASKQ
KDVDFDRLALEYLPLKFSRRHGDPSRPWNKFSINTQSEIDGSKVLDYEGN
WRDIFQNWEALAHSFPNFIDSMIHKFLNASTFDGYNPYRVTKEGFDWETI
EEDDPWSYIGYWGDHQIIYLLKFLEFIEKHQPGKLHSYFESECFVYAAVP
YTIKPYEEILNNPKDTIGYNHEWEKVINERKKSIGADGALLKSNDKSIYH
VNFIEKILATVLAKMSNFIPEAGIWLNTQRPEWNDANNALVGNGVSMVTL
YYLRRFLKFFDQLLENSTLENIKISNEMVEFYHKVRETLMENQHLLAGSI
SDTDRKVILDKLGNAAADYRFQIYNSGFWGKKRTHSMQGLKNFTKVSLQF
IDHSIKANQRPDKLYHAYNLMSVEKNKEIAISYLSEMLEGQVAVLSSGFL
SSKENLAVLDGLKNSALFREDQYSYLLYPNKELPKFLDKNTISKEAVSKS
ELLSLLVSKSNKQVIEKDSIGEYHFNGEFNNASNLKQALEDLSQQNEYKD
LVAKESKTVEAIFEDVFNHKAFTGRSGTFYGYEGLGSIYWHMVSKLQLAV
LECCLKAVEEKESEEVIGRLLEHYYEINEGIGVHKSPSLYGAFPTDAYSH
TPAGKGAQQPGMTGQVKEDILSRFGELGIFVKNGCLELNPCLLRKDEFLK
EAKTFDYVTVNFQHQSLELVEKSLAFTYCQIPIIYKIANQKCIEVFTNDG
KSAKAASLILDKQTSQDVFGRTGIINKIEVSILESDLR

Ligand information

Ligand ID

BGC

InChI

InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1

InChIKey

WQZGKKKJIJFFOK-VFUOTHLCSA-N

SMILES

Software	SMILES
OpenEye OEToolkits 1.7.6	C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370	OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370	OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6	C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01	OC1C(O)C(OC(O)C1O)CO

Formula

C6 H12 O6

Name

beta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose

PDB chain

6hq8 Chain D Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	6hq8 The structure of a GH149 beta-(1 → 3) glucan phosphorylase reveals a new surface oligosaccharide binding site and additional domains that are absent in the disaccharide-specific GH94 glucose-beta-(1 → 3)-glucose (laminaribiose) phosphorylase.
Resolution	2.25 Å
Binding residue (original residue number in PDB)	G986 E990
Binding residue (residue number reindexed from 1)	G968 E972
Annotation score	4

External links

PDB	RCSB:6hq8, PDBe:6hq8, PDBj:6hq8
PDBsum	6hq8
PubMed	31134667

[Back to BioLiP]