Structure of PDB 6gfq Chain B Binding Site BS01

Receptor Information

>6gfq Chain B (length=338) Species: 197221 (Thermosynechococcus vestitus BP-1)

SMVRVAINGFGRIGRNFMRCWLQRKANSKLEIVGINDTSDPRTNAHLLKY
DSMLGIFQDAEITADDDCIYAGGHAVKCVSDRNPENLPWSAWGIDLVIEA
TGVFTSREGASKHLSAGAKKVLITAPGKGNIPTYVVGVNHHTYDPSEDIV
SNASCTTNCLAPIVKVLHEAFGIQQGMMTTTHSYTGDQRLLDASHRDLRR
ARAAAMNIVPTSTGAAKAVGLVIPELQGKLNGIALRVPTPNVSVVDFVAQ
VEKPTIAEQVNQVIKEASETTMKGIIHYSELELVSSDYRGHNASSILDAS
LTMVLGGNLVKVVAWYDNEWGYSQRVLDLAEHMAAHWA

Ligand information

>6gfq Chain C (length=22) Species: 197221 (Thermosynechococcus vestitus BP-1)

KTSFQQYCDDNPDAAECRIYDD

Receptor-Ligand Complex Structure

Structure summary

• PDB: 6gfq Structural basis of light-induced redox regulation in the Calvin-Benson cycle in cyanobacteria.
• Resolution: 1.4 Å
• Binding residue (original residue number in PDB): R81 V102 S153 T155 H181 T184 G185 D186 R188 S193 H194 R195 R199 T212 G213 R235
• Binding residue (residue number reindexed from 1): R82 V103 S154 T156 H182 T185 G186 D187 R189 S194 H195 R196 R200 T213 G214 R236

Enzymatic activity

• Enzyme Commision number: 1.2.1.-

Gene Ontology

Molecular Function

• GO:0000166 nucleotide binding
• GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
• GO:0016491 oxidoreductase activity
• GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
• GO:0046872 metal ion binding
• GO:0050661 NADP binding
• GO:0051287 NAD binding

Biological Process

• GO:0006006 glucose metabolic process

External links

• PDB: RCSB:6gfq, PDBe:6gfq, PDBj:6gfq
• PDBsum: 6gfq
• PubMed: 31570616
• UniProt: Q8DIW5