Structure of PDB 6frd Chain B Binding Site BS01

Receptor Information
>6frd Chain B (length=331) Species: 5691 (Trypanosoma brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TAITKVEREAVLVCELPSFDVTDVEFDLFRARESTDKPLDVAAAIAYRLL
LGSGLPQKFGCSDEVLLNFILQCRKKYRNVPYHNFYHVVDVCQTIHTFLY
RGNVYEKLTELECFVLLITALVHDLDHMGLNNSFYLKTESPLGILSSASG
NTSVLEVHHCNLAVEILSDPESDVFDGLEGAERTLAFRSMIDCVLATDMA
KHGSALEAFLASAADQSSDEAAFHRMTMEIILKAGDISNVTKPFDISRQW
AMAVTEEFYRQGDMEKERGVEVLPMFDRSKNMELAKGQIGFIDFVAAPFF
QKIVDACLQGMQWTVDRIKSNRAQWERVLET
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6frd Chain B Residue 1001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6frd Crystal structure of T. brucei PDE-B1 catalytic domain with inhibitor NPD-637
Resolution2.2 Å
Binding residue
(original residue number in PDB)		H673 H709 D710 D822
Binding residue
(residue number reindexed from 1)		H87 H123 D124 D236
Annotation score1
Enzymatic activity
Enzyme Commision number 3.1.4.-
Gene Ontology
Molecular Function
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0008081 phosphoric diester hydrolase activity
Biological Process
GO:0007165 signal transduction

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Molecular Function
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Biological Process
External links
PDB RCSB:6frd, PDBe:6frd, PDBj:6frd
PDBsum6frd
PubMed
UniProtQ8WQX9

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