Structure of PDB 6fju Chain B Binding Site BS01

Receptor Information
>6fju Chain B (length=173) Species: 311458 (Candidatus Caldarchaeum subterraneum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HMRVRIYPLALAKVVKHAASSLQREVAGLLVGKSAGKVLEIWDAVTGEQY
GTYVQLDEMVMAKVAEELSKSDKNLYIVGWYHSHPGLDVFLSPTDIDTQK
RYQAMFSKAVALVVDPVDYAKTRRISSLKFKVFQISKEGRVVSLPVSIGV
HRAKLLESTFHALSTFDFMHILG
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6fju Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6fju Rpn11-mediated ubiquitin processing in an ancestral archaeal ubiquitination system.
Resolution1.65 Å
Binding residue
(original residue number in PDB)
H83 H85 D96
Binding residue
(residue number reindexed from 1)
H82 H84 D95
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008233 peptidase activity
GO:0008237 metallopeptidase activity
GO:0046872 metal ion binding
Cellular Component
GO:0000502 proteasome complex

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:6fju, PDBe:6fju, PDBj:6fju
PDBsum6fju
PubMed30002364
UniProtE6N8B9

[Back to BioLiP]