Structure of PDB 6egx Chain B Binding Site BS01

Receptor Information
>6egx Chain B (length=199) Species: 89463 (Sacbrood virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GDLVIASSEPTQQFRSLTNRWMPINSIRVTVNGKRNDLLAQYYIPEDFLS
THAKCAPNTIPFETYVYGKYELEMKFVANGNKFQCGKVIISVKFDSYQAD
NINTGFQAALSRPHIMLDLSTNNEGVLKIPFRYHRAFVRNQTHKTATAGV
RPGKFASIYVQVLSPLQTGEGGANDMFIRPFYRYTRAEFAGMSYKVPLT
Ligand information
>6egx Chain D (length=26) Species: 89463 (Sacbrood virus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
DNPHRFLPANVSNRWNEYSSAYLPRV
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6egx Virion structure and genome delivery mechanism of sacbrood honeybee virus.
Resolution4.06 Å
Binding residue
(original residue number in PDB)
L78 Q81 Y83 D87 Y137 D140 N141 V190 R191 P192 K194
Binding residue
(residue number reindexed from 1)
L38 Q41 Y43 D47 Y97 D100 N101 V150 R151 P152 K154
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity

View graph for
Molecular Function
External links
PDB RCSB:6egx, PDBe:6egx, PDBj:6egx
PDBsum6egx
PubMed29987012
UniProtA0A223DN66

[Back to BioLiP]