Structure of PDB 6dm6 Chain B Binding Site BS01

Receptor Information
>6dm6 Chain B (length=377) Species: 272944 (Rickettsia conorii str. Malish 7) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HHMLKLIVETKTLVQSLGFASSVVEKPEYANIKLSAKDGNLELSSTNMDL
YLSQKIAVQVVSEGECTVSTKTLNDIVRKLPDSELTLTDLGTTGLEIKGK
NCKFNLFTLPVSSFPAMDSINPEASFKISCTDFAKIIESTKFSISLDETR
YNLNGVYLHIKDKEFCSASTDGHRLSISWVTLEKQIKNFGVILPQKSAEE
ILKIVKDPKNINEDIEILLSSNKIKFICNENTSMLSKLIDGTFPDYSTFI
PESSSSKLVINRKMFADSIERIAIITVEKFRAVKLSLSRETLEISAVGEA
RGNAKEVINSSQDKESFYEYNSDESLAIGFNPQYLEDVLKAVKSDVVELY
FSDVSAPVLIKFPENPKDIFVVMPVKV
Ligand information
Receptor-Ligand Complex Structure
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PDB6dm6 Structure of DNA polymerase III subunit beta from Rickettsia conorii in complex with a natural product
Resolution2.25 Å
Binding residue
(original residue number in PDB)		G174 H175 F251 M375 P376 V377 K378
Binding residue
(residue number reindexed from 1)		G172 H173 F249 M373 P374 V375 K376
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0008408 3'-5' exonuclease activity
Biological Process
GO:0006260 DNA replication
GO:0006271 DNA strand elongation involved in DNA replication
GO:0071897 DNA biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0009360 DNA polymerase III complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6dm6, PDBe:6dm6, PDBj:6dm6
PDBsum6dm6
PubMed
UniProtQ92I37|DPO3B_RICCN Beta sliding clamp (Gene Name=dnaN)

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