Structure of PDB 6dly Chain B Binding Site BS01

Receptor Information
>6dly Chain B (length=384) Species: 216594 (Mycobacterium marinum M) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TDLKFRLVRESFADAVSWVAKNLPTRPAVPVLSGVLLTGSDEGLTISGFD
YEVSAEVRVPAEIASPGTVLVSGRLLSDITRALPNKPVDFYVDGNRVALT
CGNARFSLPTMAVEDYPTLPTLPEDTGTLPAELFSEAIGQVAIAAGRDDT
LPMLTGIRVEISGEKVVLAATDRFRLAVRELTWNALSPDIEAAVLVPAKT
LGEAAKDGSEVRLSLGAGMGVGKDGLLGISGDGKRSTTRLLDAEFPKFRQ
LLPAEHTAVASADVAELTEAIKLVALVADRGAQVRMEFADGMLRLSAGAD
DVGRAEEDIAVEFAGQPLTIAFNPTYLIDGLASLHSERVSFGFTTPGKPA
LLRPASAEDRIVDQGPFAAVPTDYVYLLMPVRLP
Ligand information
Receptor-Ligand Complex Structure
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PDB6dly Crystal structure of DNA polymerase III subunit beta from Mycobacterium marinum in complex with a natural product
Resolution2.1 Å
Binding residue
(original residue number in PDB)		R181 F182 L262 M394 R397
Binding residue
(residue number reindexed from 1)		R173 F174 L251 M379 R382
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003887 DNA-directed DNA polymerase activity
GO:0008408 3'-5' exonuclease activity
Biological Process
GO:0006260 DNA replication
GO:0006271 DNA strand elongation involved in DNA replication
GO:0071897 DNA biosynthetic process
Cellular Component
GO:0005737 cytoplasm
GO:0009360 DNA polymerase III complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6dly, PDBe:6dly, PDBj:6dly
PDBsum6dly
PubMed
UniProtB2HI47

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