Structure of PDB 6dkc Chain B Binding Site BS01

Receptor Information
>6dkc Chain B (length=230) Species: 307796 (Saccharomyces cerevisiae YJM789) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SPEFMSQYGFVRVPREVEKAIPVVNAPRPRAVVPPPNSETARLVREYAAK
ELTAPVLNHSLRVFQYSVAIIRDQFPAWDLDQEVLYVTCLLHDIATTDKN
MRATKMSFEYYGGILSRELVFNATGGNQDYADAVTEAIIRHQDLTGTGYI
TTLGLILQIAVTLDNVGSNTDLIHIDTVSAINEQFPRLHWLSCFATVVDT
ENSRKPWGHTSSLGDDFSKKVICNTFGYTK
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6dkc Chain B Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6dkc Structure of Ddi2, a highly inducible detoxifying metalloenzyme fromSaccharomyces cerevisiae.
Resolution2.9 Å
Binding residue
(original residue number in PDB)		H55 H88 D89
Binding residue
(residue number reindexed from 1)		H59 H92 D93
Annotation score1
Enzymatic activity
Enzyme Commision number 4.2.1.69: cyanamide hydratase.
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6dkc, PDBe:6dkc, PDBj:6dkc
PDBsum6dkc
PubMed31152065
UniProtA7A1Y4

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