Structure of PDB 6dk4 Chain B Binding Site BS01

Receptor Information
>6dk4 Chain B (length=113) Species: 197 (Campylobacter jejuni) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LCVLKILKRHEHPNIDELYIEIKKEYSLATVYKNLNTLQEQGLVVEINVL
QKTCYDIYEEEHIHVVCTKCGGIEDLSFKDAKLYEYQEHLEKKIGNLVNH
LSVCAYVDNCKKC
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain6dk4 Chain B Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6dk4 Crystal structure of Campylobacter jejuni peroxide regulator.
Resolution2.71 Å
Binding residue
(original residue number in PDB)
H30 D78 H84 H86 D97
Binding residue
(residue number reindexed from 1)
H12 D56 H62 H64 D75
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000976 transcription cis-regulatory region binding
GO:0003700 DNA-binding transcription factor activity
GO:0008270 zinc ion binding
GO:0043565 sequence-specific DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0045892 negative regulation of DNA-templated transcription
GO:1900376 regulation of secondary metabolite biosynthetic process
Cellular Component
GO:0032993 protein-DNA complex

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:6dk4, PDBe:6dk4, PDBj:6dk4
PDBsum6dk4
PubMed29856899
UniProtQ0PBI7

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