Structure of PDB 6dj8 Chain B Binding Site BS01
Receptor Information
>6dj8 Chain B (length=376) Species:
224326
(Borreliella burgdorferi B31) [
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NTFFICETNQIMNEIEKAKGIILNRNMNDIWSALLIEVKKSNLIIKSTDR
NIFFESTISIVSETDFKVLINASNFYDAVKAFNFYKKIKIVFNENNSKLE
IMGEEYEDHLKEPTFSYEEIENYNYDMVNEDYTFGIEIKQKSFKKVINRI
AFSAHLDESKNVLNGVYFSKDEDSKLLLVSTNGHRMSICKTEVIVEEDVN
FIVPVKIFNFLKHLMSGEGMVKIKFSDKKFYVEFDNYKIACSLINGNYPD
YKSIIPKEQKNKSLVSLGILKDRLARVNLYVDKSRKLVLTFSELQLKLLG
EDLITGRKGEFFIKDPNYLYDGADEVMAINISYFVEAISVFETSKIEIQF
NSGNVLKLSEPENFNFTHLIMPMSLG
Ligand information
>6dj8 Chain D (length=10) Species:
1883
(Streptomyces) [
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VKTLKLVPLG
Receptor-Ligand Complex Structure
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PDB
6dj8
Structure of DNA polymerase III subunit beta from Borrelia burgdorferi in complex with a natural product
Resolution
2.05 Å
Binding residue
(original residue number in PDB)
G192 H193 R194 D259 I263 M380 P381 S383
Binding residue
(residue number reindexed from 1)
G183 H184 R185 D250 I254 M371 P372 S374
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003887
DNA-directed DNA polymerase activity
GO:0008408
3'-5' exonuclease activity
Biological Process
GO:0006260
DNA replication
GO:0006271
DNA strand elongation involved in DNA replication
GO:0071897
DNA biosynthetic process
Cellular Component
GO:0005737
cytoplasm
GO:0009360
DNA polymerase III complex
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6dj8
,
PDBe:6dj8
,
PDBj:6dj8
PDBsum
6dj8
PubMed
UniProt
P33761
|DPO3B_BORBU Beta sliding clamp (Gene Name=dnaN)
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