Structure of PDB 6d8p Chain B Binding Site BS01 |
| >6d8p Chain B (length=752) Species: 349102 (Cereibacter sphaeroides ATCC 17025)
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RQLVSNGFEVNLPDQVEVIVRDLPDPSKVKEERTRLMGYWFVHWFDGKLF
HLRIKAGGPNVDGEHRAIRTAEHPWLLRARLDDALEEALPKYAAVKKRPF
TFLAQKDELIDAAATAAGLSHRLLNSFKVIPRFALSPKIYEPVDGTTRVG
VFVTIGMRYDIEASLRDLLEAGIDLRGMYVVRRKRQRGLLGRVSDDMVQL
FEETDLASVNVNDAKLEGSKENFTRCLSALLGHNYKKLLNALDDQEAGYR
TGPRFDDAVRRMGEFLAKKPIRLADNINAQVGDRIVFSNEGQARNVRLAP
KVEYVFDRTGAKSAEYAWRGLSQFGPFDRPSFANRSPRILVVYPSSTQGK
VENFLSAFRDGMGSNYSGFSKGFVDLMGLTKVEFVMCPVEVSSADRNGAH
TKYNSAIEDKLAGAGEVHAGIVVLFEDHARLPDDRNPYIHTKSLLLTLGV
PTQQVRMPTVLLEPKSLQYTLQNFSIATYAKLNGTPWTVNHDKAINDELV
VGMGLAELSGSRTEKRQRFVGITTVFAGDGSYLLGNVSKECEYEGYSDAI
RESMTGILRELKKRNNWRPGDTVRVVFHAHRPLKRVDVASIVFECTREIG
SDQNIQMAFVTVSHDHPFVLIDRSERGLEAYKGSTARKGVFAPPRGAISR
VGRLTRLLAVNSPQLIKRANTPLPTPLLVSLHPDSTFKDVDYLAEQALKF
TSLSWRSTLPAATPVTIFYSERIAELLGRLKSIPNWSSANLNIKLKWSRW
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| PDB | 6d8p Accommodation of Helical Imperfections in Rhodobacter sphaeroides Argonaute Ternary Complexes with Guide RNA and Target DNA. |
| Resolution | 2.1 Å |
Binding residue
(original residue number in PDB) | P43 P45 W63 D65 R151 G175 M176 R177 Y178 G210 L211 E242 G243 K245 R275 A454 Y463 K467 Q478 Q479 V480 R481 T484 T495 N498 K506 R537 R543 K609 R610 K692 R731 S732 A737 F743 R754 L777 |
Binding residue
(residue number reindexed from 1) | P24 P26 W44 D46 R132 G156 M157 R158 Y159 G188 L189 E217 G218 K220 R250 A429 Y438 K442 Q453 Q454 V455 R456 T459 T470 N473 K481 R512 R518 K584 R585 K667 R706 S707 A712 F718 R729 L752 |
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| Enzyme Commision number |
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