Structure of PDB 6cwp Chain B Binding Site BS01
Receptor Information
>6cwp Chain B (length=307) Species:
376686
(Flavobacterium johnsoniae UW101) [
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LVPRGSHMSIFDKRVNYKPFEYPEVLQFTEAINKAYWVHTEVDFTADTQD
FHAHLSLAEKTAVKNSLLAIAQIEVAVKSFWGNIYEHFPKPEFNGLGSTF
AECEFRHSEAYSRLLEVLGYNDEFEKLLDVPVIRRRVDYLSNVLKDTKSQ
DNRKYMVSLILFSILIENVSLFSQFAILLSFTRFKGYMKNVSNIIAWTSI
DEQIHANGGIYIINKIREEFPDYFDEETLALVRETVKDSIAVESDILDWI
FEEGEIESIKKGDLVNFMKFRIDESLKQINIPVIFDVKVEDYKALAWFEE
EVFANSL
Ligand information
>6cwp Chain F (length=6) Species:
986
(Flavobacterium johnsoniae) [
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VEYTKH
Receptor-Ligand Complex Structure
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PDB
6cwp
Structural Basis for Superoxide Activation of Flavobacterium johnsoniae Class I Ribonucleotide Reductase and for Radical Initiation by Its Dimanganese Cofactor.
Resolution
1.92 Å
Binding residue
(original residue number in PDB)
M1 K6 R7 V8 N9 P12 E14
Binding residue
(residue number reindexed from 1)
M8 K13 R14 V15 N16 P19 E21
Enzymatic activity
Enzyme Commision number
1.17.4.1
: ribonucleoside-diphosphate reductase.
Gene Ontology
Molecular Function
GO:0004748
ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
Biological Process
GO:0009263
deoxyribonucleotide biosynthetic process
Cellular Component
GO:0016020
membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6cwp
,
PDBe:6cwp
,
PDBj:6cwp
PDBsum
6cwp
PubMed
29609464
UniProt
A5FCJ5
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