Structure of PDB 6bjh Chain B Binding Site BS01

Receptor Information
>6bjh Chain B (length=144) Species: 39443 (Carnation Italian ringspot virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RAIQGNDTREQANGERWDGGSGGITSPFKLPDESPSWTEWRLYNDETNDN
PLGFKESWGFGKVVFKRYLRYDRTEASLHRVLGSWTGDSVNYAASRFLGA
NQVGCSYSIRFRGVSVTISGGSRTLQHLCEMAIRSKQELLQLTP
Ligand information
>6bjh Chain C (length=21) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ucgaaguauuccgcguacguu
.....................
Receptor-Ligand Complex Structure
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PDB6bjh Structural insights into interactions between viral suppressor of RNA silencing protein p19 mutants and small RNAs.
Resolution2.58 Å
Binding residue
(original residue number in PDB)		R18 W19 P37 W39 W42 K60 Q107 V108 G109 S124
Binding residue
(residue number reindexed from 1)		R16 W17 P35 W37 W40 K55 Q102 V103 G104 S119
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0019049 virus-mediated perturbation of host defense response
GO:0052170 symbiont-mediated suppression of host innate immune response
Cellular Component
GO:0044423 virion component

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6bjh, PDBe:6bjh, PDBj:6bjh
PDBsum6bjh
PubMed31021526
UniProtQ66104|P19_CIRV RNA silencing suppressor p19 (Gene Name=ORF4)

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