Structure of PDB 6b9v Chain B Binding Site BS01

Receptor Information
>6b9v Chain B (length=253) Species: 204669 (Candidatus Koribacter versatilis Ellin345) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RATLTVLGSGTSMGVPTIGCDCAVCSSSDPHDRRLRPSVMVQYDGKLVLI
DTTPDFREQALREGIKKIDAIVYTHGHADHILGLDDVRPLSFPRITGGAR
VPLYANEKTERVLKHVFKYIIAQVEMHRVHHEAIELFGAKFIPVPVIHGE
TEIYGYRFGSAAYLTDFSSIPDASMEMLRGLDILFLDALRHKPHPTHSTL
DNSVSIAEKLKAKHTYFTHISHDLPHEETNRQLPAGIQLAHDGLKLEFEL
CLE
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain6b9v Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6b9v An unusual diphosphatase from the PhnP family cleaves reactive FAD photoproducts.
Resolution1.88 Å
Binding residue
(original residue number in PDB)
H78 H80 H160 D178
Binding residue
(residue number reindexed from 1)
H75 H77 H148 D166
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6b9v, PDBe:6b9v, PDBj:6b9v
PDBsum6b9v
PubMed29229761
UniProtQ1INB9

[Back to BioLiP]