Structure of PDB 6ap1 Chain B Binding Site BS01

Receptor Information

>6ap1 Chain B (length=322) Species: 208964,559292 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

NKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKG
NRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESE
KLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMN
GVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEIN
VGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFK
DVSETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRP
TVNEDDLLKQEQFTRDFGQEGN

Ligand information

>6ap1 Chain G (length=8) Species: 4932 (Saccharomyces cerevisiae) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

DEIVNKVL

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6ap1 The AAA ATPase Vps4 binds ESCRT-III substrates through a repeating array of dipeptide-binding pockets.
Resolution	3.2 Å
Binding residue (original residue number in PDB)	K205 W206
Binding residue (residue number reindexed from 1)	K94 W95

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0005524	ATP binding
GO:0016887	ATP hydrolysis activity
GO:0042802	identical protein binding

	Cellular Component
GO:0005576	extracellular region

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Molecular Function

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Cellular Component

External links

PDB	RCSB:6ap1, PDBe:6ap1, PDBj:6ap1
PDBsum	6ap1
PubMed	29165244
UniProt	P52917\|VPS4_YEAST Vacuolar protein sorting-associated protein 4 (Gene Name=VPS4); Q9I747

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