Structure of PDB 6aoy Chain B Binding Site BS01

Receptor Information
>6aoy Chain B (length=157) Species: 364106 (Escherichia coli UTI89) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDLSQHISCWNDYGGWY
DTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGDKTPM
PLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIIS
NNSVVMP
Ligand information
Ligand ID145
InChIInChI=1S/C12H15NO8/c14-5-8-9(15)10(16)11(17)12(21-8)20-7-4-2-1-3-6(7)13(18)19/h1-4,8-12,14-17H,5H2/t8-,9+,10+,11-,12-/m1/s1
InChIKeyKUWPCJHYPSUOFW-YBXAARCKSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04[O-][N+](=O)c2c(OC1OC(C(O)C(O)C1O)CO)cccc2
OpenEye OEToolkits 1.5.0c1ccc(c(c1)[N+](=O)[O-])OC2C(C(C(C(O2)CO)O)O)O
OpenEye OEToolkits 1.5.0c1ccc(c(c1)[N+](=O)[O-])O[C@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O
CACTVS 3.341OC[C@H]1O[C@@H](Oc2ccccc2[N+]([O-])=O)[C@H](O)[C@@H](O)[C@H]1O
CACTVS 3.341OC[CH]1O[CH](Oc2ccccc2[N+]([O-])=O)[CH](O)[CH](O)[CH]1O
FormulaC12 H15 N O8
Name2-nitrophenyl beta-D-galactopyranoside;
1-O-[O-NITROPHENYL]-BETA-D-GALACTOPYRANOSE;
2-nitrophenyl beta-D-galactoside;
2-nitrophenyl D-galactoside;
2-nitrophenyl galactoside
ChEMBLCHEMBL1229648
DrugBankDB01920
ZINCZINC000003860652
PDB chain6aoy Chain B Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6aoy Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection.
Resolution1.8 Å
Binding residue
(original residue number in PDB)
F1 N44 D45 D51 D53 K132 A134 N140
Binding residue
(residue number reindexed from 1)
F1 N44 D45 D51 D53 K132 A134 N140
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0009289 pilus

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Biological Process

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Cellular Component
External links
PDB RCSB:6aoy, PDBe:6aoy, PDBj:6aoy
PDBsum6aoy
PubMed29507247
UniProtQ1RBS0

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