Structure of PDB 5zfs Chain B Binding Site BS01

Receptor Information

>5zfs Chain B (length=294) Species: 1665 (Arthrobacter globiformis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MKIGCHGLVWTGHFDAEGIRYSVQKTREAGFDLVEFPLMDPFSFDVQTAK
SALAEHGLAASASLGLSDATDVSSEDPAVVKAGEELLNRAVDVLAELGAT
DFCGVIYSAMKKYMEPATAAGLANSKAAVGRVADRASDLGINVSLEVVNR
YETNVLNTGRQALAYLEELNRPNLGIHLDTYHMNIEESDMFSPILDTAEA
LRYVHIGESHRGYLGTGSVDFDTFFKALGRIGYDGPVVFESFSSSVVAPD
LSRMLGIWRNLWADNEELGAHANAFIRDKLTAIKTIELHRSHHH

Ligand information

Ligand ID

InChI

InChI=1S/Mn/q+2

InChIKey

WAEMQWOKJMHJLA-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mn+2]
CACTVS 3.341	[Mn++]

Formula

Name

MANGANESE (II) ION

PDB chain

5zfs Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5zfs X-ray structure of Arthrobacter globiformis M30 ketose 3-epimerase for the production of D-allulose from D-fructose.
Resolution	1.96 Å
Binding residue (original residue number in PDB)	E146 D179 H205 E240
Binding residue (residue number reindexed from 1)	E146 D179 H205 E240
Annotation score	1

Enzymatic activity

Enzyme Commision number

5.1.3.-

Gene Ontology

	Molecular Function
GO:0016853	isomerase activity
GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0030145	manganese ion binding
GO:0046872	metal ion binding

	Biological Process
GO:0005975	carbohydrate metabolic process

View graph for
Molecular Function

View graph for
Biological Process

External links

PDB	RCSB:5zfs, PDBe:5zfs, PDBj:5zfs
PDBsum	5zfs
PubMed	30279320
UniProt	A0A1L7NQ96\|KET3E_ARTGO Ketose 3-epimerase (Gene Name=DAE)

[Back to BioLiP]