Structure of PDB 5z28 Chain B Binding Site BS01

Receptor Information
>5z28 Chain B (length=98) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IKVCMNALCGAASTSGEWKKGWPMRSGDLASLCDKCGCAYEQSIFCEVFH
AKESGWRECNSCDKRLHCGCIASRFMMELLENGGVTCISCAKKSGLIS
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5z28 Chain B Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5z28 Crystal structure of AtVAL12 PHD-Like domain
Resolution2.245 Å
Binding residue
(original residue number in PDB)
C62 C65 C90 C93
Binding residue
(residue number reindexed from 1)
C59 C62 C87 C90
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:5z28, PDBe:5z28, PDBj:5z28
PDBsum5z28
PubMed
UniProtQ5CCK4|VAL2_ARATH B3 domain-containing transcription repressor VAL2 (Gene Name=VAL2)

[Back to BioLiP]