Structure of PDB 5yxc Chain B Binding Site BS01

Receptor Information
>5yxc Chain B (length=187) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GKPLTEVEQKAANGVFDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQ
KKADADKTKTFAEIKDYYHKGYATDIEMIGIEDGIVEFHRNNETTSCKYD
YDGYKILTYKSGKKGVRYLFECKDPESKAPKYIQFSDHIIAPRKSSHFHI
FMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5yxc Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5yxc Crystal structure of E. coli ZinT with one zinc-binding mode and complexed with citrate
Resolution1.763 Å
Binding residue
(original residue number in PDB)		H167 H176 H178
Binding residue
(residue number reindexed from 1)		H138 H147 H149
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:5yxc, PDBe:5yxc, PDBj:5yxc
PDBsum5yxc
PubMed29596824
UniProtP76344|ZINT_ECOLI Metal-binding protein ZinT (Gene Name=zinT)

[Back to BioLiP]