Structure of PDB 5yuf Chain B Binding Site BS01

Receptor Information
>5yuf Chain B (length=47) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EFQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPL
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5yuf Chain B Residue 101 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5yuf RING tetramerization is required for nuclear body biogenesis and PML sumoylation.
Resolution1.6 Å
Binding residue
(original residue number in PDB)
C57 C60 C77 C80
Binding residue
(residue number reindexed from 1)
C7 C10 C27 C30
Annotation score4
Enzymatic activity
Enzyme Commision number 2.3.2.-
External links
PDB RCSB:5yuf, PDBe:5yuf, PDBj:5yuf
PDBsum5yuf
PubMed29599493
UniProtP29590|PML_HUMAN Protein PML (Gene Name=PML)

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