Structure of PDB 5yfb Chain B Binding Site BS01

Receptor Information
>5yfb Chain B (length=690) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HRERFLADKSAPLCGMDIRKSFDQLSSKEKLYTHYVTEASWAGARIIQAQ
WTPQATDLYDLLILTFSVNGKLADLNALKTSSGLSEDDWEALIQYTVQVL
SNLVNYKTFGFTKIIPRVDAEKFESVVKASSNADQGSALFTKLKQHIYAL
SPESALFIGKRKDGHVSNYYLGEPVGDAEVDAIQNVAEKLGVDILNTRVK
KNGAGDYTLLVASAKTSPPSVHDFQIDSTPAKLTIEYGDYASSLTKVVAA
LQEAKQYTANDHQSAMIEGYVKSFNSGSIPEHKAASTEWVKDIGPVVESY
IGFVETYVDPYGGRAEWEGFTAIVDKQLSAKYEALVNGAPKLIKSLPWGT
DFEVDVFRKPDFTALEVVSFATGGIPAGINIPNYYEVRESTGFKNVSLAN
ILAAKVPNEELTFIHPDDVELYNAWDSRAFELQVANHELLGHGSGKLFQE
GADGKLNFDPEKVINPLTGKPITSWYKPGQTPDSVLGEVSSSMEECRAET
VALYLVSNLDILKIFNYVDKQDIEDIQYITFLLMARAGLRALEFYDPATK
KHGQAHMQARMGITQYLIQAGIARLELIQDANGELENLYVRVDREKVLSK
GKEVVGQLLIELQVRKSTADGTGSRDFYTTLTEPISGWEGKIRDIVLKKK
LPRKIFVQPNTFVVNGEVQLKEYPLTAAGVIESFIERRLL
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5yfb Chain B Residue 801 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5yfb Crystal structures of Aflatoxin-oxidase from Armillariella tabescens reveal a dual activity enzyme.
Resolution2.2 Å
Binding residue
(original residue number in PDB)		H443 H448 E501
Binding residue
(residue number reindexed from 1)		H437 H442 E495
Annotation score4
Enzymatic activity
Enzyme Commision number 3.4.14.4: dipeptidyl-peptidase III.
Gene Ontology
Molecular Function
GO:0004177 aminopeptidase activity
GO:0008235 metalloexopeptidase activity
GO:0008237 metallopeptidase activity
GO:0008239 dipeptidyl-peptidase activity
GO:0046872 metal ion binding
Biological Process
GO:0006508 proteolysis
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5yfb, PDBe:5yfb, PDBj:5yfb
PDBsum5yfb
PubMed29050944
UniProtB0S4Q0

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