Structure of PDB 5ya6 Chain B Binding Site BS01

Receptor Information
>5ya6 Chain B (length=165) Species: 243232 (Methanocaldococcus jannaschii DSM 2661) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ASGLMCIGVTGHYDKTLGGIDKLAIYITPNAGSAPIDLKNAKLFLIYDGE
SHVLNYSTVTTATLGADDIFNSSAITDWSLADSSSYVVGVIQDADGSLSN
GVINKGDIAVLLVNANAVFNKAIPTRSEVSGQFQPEFGAPAVIQFTTPAA
YTQTVIELQHHHHHH
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain5ya6 Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5ya6 High-resolution archaellum structure reveals a conserved metal-binding site.
Resolution1.5 Å
Binding residue
(original residue number in PDB)		D139 D141 S143 N150 D153
Binding residue
(residue number reindexed from 1)		D93 D95 S97 N104 D107
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0097588 archaeal or bacterial-type flagellum-dependent cell motility

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Molecular Function
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Biological Process
External links
PDB RCSB:5ya6, PDBe:5ya6, PDBj:5ya6
PDBsum5ya6
PubMed30898768
UniProtQ58301|FLAB1_METJA Flagellin B1 (Gene Name=flaB1)

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