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Receptor Information

>5wzq Chain B (length=611) Species: 1681 (Bifidobacterium bifidum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MMQFTMSGTMLRFDETTLRFSFSRDGATWSGCDGIEPQLTREDRSFSFAG
AATVTHERIETGTGVGVRSVFAGFAGADYAFETYIWIERSSGDVLCEWVP
LREIDRVLWPAPLSFDRADAHDVTLITHEQGVMIPNSWPTEVGTDAVSFG
GRFETAGGYMPWFAQLRSDGHAYIAICETPWNAGYDIDHPAGGPYTHVGM
WFEPSLGRMDYRRVVRYRLLDHADHTAICKTYRAYVNERGRLRTLAEKAA
RNPSVRDLLGRSWVAVGIKTNVQPDSSFYDPAQPGKNDSLVTFAQRERQM
RTLHEMGAGRLYLALAGWAQPGYDNGHPDYLPACREAGGWKGMKSLIDAC
HEQGDLFGTADQYRDYYFAARTFDPRNAIRLADGTMPEHAMWAGGRQTYL
CAELAPDYVRRNFSEIATHGIVLDCAYLDVFTCNEGDECSHPEHRMTRRE
CYERRAECFEYLLAHGILTSSEEVSDWAVPSLVFCHYAPYDFQMRSPDAP
RHGIPVPLYNLVYHDCVIQPWMMDRVAGGDDYMLYALLNGGAPYLIRDAA
YTENDIERCAVVAGLHRRVGMQELVRHDLVGGDPLVQRSVFADGTAVTCD
FHAQTYEVAAN

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

5wzq Chain B Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5wzq The first crystal structure of a family 129 glycoside hydrolase from a probiotic bacterium reveals critical residues and metal cofactors
Resolution	1.9 Å
Binding residue (original residue number in PDB)	C407 C445 H450
Binding residue (residue number reindexed from 1)	C401 C439 H444
Annotation score	4

Enzyme Commision number

3.2.1.-

	Molecular Function
GO:0016798	hydrolase activity, acting on glycosyl bonds
GO:0033926	endo-alpha-N-acetylgalactosaminidase activity
GO:0046872	metal ion binding

PDB	RCSB:5wzq, PDBe:5wzq, PDBj:5wzq
PDBsum	5wzq
PubMed	28546425
UniProt	G5ELM1

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Structure of PDB 5wzq Chain B Binding Site BS01