Structure of PDB 5vgc Chain B Binding Site BS01

Receptor Information
>5vgc Chain B (length=204) Species: 564886 (Enterobacteria phage YYZ-2008) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VDLTPYILPGVSFLSDIPQETLSEIRNQTIRGEAQIRLGELMVSIRPMQV
NGYFMGSLNQDGLSNDNIQIGLQYIEHIERTLNHGSLTSREVTVLREIEM
LENMDLLSNYQLEELLDKIEVCAFNVEHSLRTCPVTLCEPEDGVFMRNSM
NSNVCMLYDKMALIHLVKTRAAHPLSRESIAVSMIVGRDNAAFDPDRGNF
VLKN
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain5vgc Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5vgc Crystal structure of the NleG5-1 effector (C200A) from Escherichia coli O157:H7 str. Sakai
Resolution2.6 Å
Binding residue
(original residue number in PDB)		E101 L103
Binding residue
(residue number reindexed from 1)		E99 L101
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004842 ubiquitin-protein transferase activity
GO:0046872 metal ion binding
Biological Process
GO:0044403 biological process involved in symbiotic interaction

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Molecular Function
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Biological Process
External links
PDB RCSB:5vgc, PDBe:5vgc, PDBj:5vgc
PDBsum5vgc
PubMed
UniProtB6DZC0

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