Structure of PDB 5vah Chain B Binding Site BS01
Receptor Information
>5vah Chain B (length=214) Species:
3988
(Ricinus communis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RRLLPFVSSEDPAQRLKQMGTLASALTELQMEFSDDLTYGMAPRSANQAR
FEEGGMQVLTKEDIETLEQCRAMCKRGDCPPLLVVFDSREGFTVEADGQI
KDMTFIAEYTGDVDYIRNREHDDCDSMMTLLLAKDPSSSLVICPDKRGNI
ARFISGINNHTLDAKKKQNCKCVRYSVNGECRVFLVATRDIAKGERLYYD
YNGYEHEYPTQHFV
Ligand information
>5vah Chain D (length=15) Species:
3702
(Arabidopsis thaliana) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ATKAARKSAPATGGV
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5vah
Molecular basis for the methylation specificity of ATXR5 for histone H3.
Resolution
2.4 Å
Binding residue
(original residue number in PDB)
M216 Q217 M263 I276 E280 M287 M288 T289 C332 R334 Y361 G363 Y364 E365 E367 Y368
Binding residue
(residue number reindexed from 1)
M56 Q57 M103 I116 E120 M127 M128 T129 C172 R174 Y201 G203 Y204 E205 E207 Y208
Enzymatic activity
Enzyme Commision number
2.1.1.369
: [histone H3]-lysine(27) N-methyltransferase.
External links
PDB
RCSB:5vah
,
PDBe:5vah
,
PDBj:5vah
PDBsum
5vah
PubMed
28383693
UniProt
B9RU15
|ATXR5_RICCO Probable Histone-lysine N-methyltransferase ATXR5 (Gene Name=ATXR5)
[
Back to BioLiP
]
