Structure of PDB 5u9z Chain B Binding Site BS01

Receptor Information

>5u9z Chain B (length=380) Species: 293653 (Streptococcus pyogenes MGAS5005) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

GMEKPTNYSQETIASIAQKYQKLAEDINKDRKNNIADQTVIYLLSESLSD
PDRVSNVTVSHDVLPNIKAIKNSTTAGLMQSDSYGGGTANMEFQTLTSLP
FYNFSSSVSVLYSEVFPKMAKPHTISEFYQGKNRIAMHPASANNFNRKTV
YSNLGFSKFLALSGSKDKFKNIENVGLLTSDKTVYNNILSLINPSESQFF
SVITMQNHIPWSSDYPEEIVAEGKNFTEEENHNLTSYARLLSFTDKETRA
FLEKLTQINKPITVVFYGDHLPGLYPDSAFNKHIENKYLTDYFIWSNGTN
EKKNHPLINSSDFTAALFEHTDSKVSPYYALLTEVLNKASVDKSPDSPEV
KAIQNDLKNIQYDVTIGKGYLLKHKTFFKI

Ligand information

Ligand ID

InChI

InChI=1S/Mn/q+2

InChIKey

WAEMQWOKJMHJLA-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mn+2]
CACTVS 3.341	[Mn++]

Formula

Name

MANGANESE (II) ION

PDB chain

5u9z Chain B Residue 901 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5u9z Discovery of glycerol phosphate modification on streptococcal rhamnose polysaccharides.
Resolution	2.001 Å
Binding residue (original residue number in PDB)	E488 T530 D711 H712
Binding residue (residue number reindexed from 1)	E46 T88 D269 H270
Annotation score	4

External links

PDB	RCSB:5u9z, PDBe:5u9z, PDBj:5u9z
PDBsum	5u9z
PubMed	30936502

[Back to BioLiP]