Structure of PDB 5u6n Chain B Binding Site BS01
Receptor Information
>5u6n Chain B (length=448) Species:
3702
(Arabidopsis thaliana) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MEHKRGHVLAVPYPSQGHITPFRQFCKRLHFKGLKTTLALTTFVFNSINP
DLSGPISIATISDGYDHGGFETADSIDDYLKDFKTSGSKTIADIIQKHQT
SDNPITCIVYDAFLPWALDVAREFGLVATPFFTQPCAVNYVYYLSYINNG
SLQLPIEELPFLELQDLPSFFSVSGSYPAYFEMVLQQFINFEKADFVLVN
SFQELELHENELWSKACPVLTIGPTIPSIYLDQRIKSDTGYDLNLFESKD
DSFCINWLDTRPQGSVVYVAFGSMAQLTNVQMEELASAVSNFSFLWVVRS
SEEEKLPSGFLETVNKEKSLVLKWSPQLQVLSNKAIGCFLTHCGWNSTME
ALTFGVPMVAMPQWTDQPMNAKYIQDVWKAGVRVKTEKESGIAKREEIEF
SIKEVMEGERSKEMKKNVKKWRDLAVKSLNEGGSTDTNIDTFVSRVQS
Ligand information
Ligand ID
BGC
InChI
InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKey
WQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370
OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370
OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6
C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01
OC1C(O)C(OC(O)C1O)CO
Formula
C6 H12 O6
Name
beta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBL
CHEMBL1614854
DrugBank
DB02379
ZINC
ZINC000003833800
PDB chain
5u6n Chain D Residue 1 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5u6n
Differences in salicylic acid glucose conjugations by UGT74F1 and UGT74F2 from Arabidopsis thaliana.
Resolution
2.001 Å
Binding residue
(original residue number in PDB)
Y13 F70 Y180
Binding residue
(residue number reindexed from 1)
Y13 F70 Y180
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.4.1.-
Gene Ontology
Molecular Function
GO:0008194
UDP-glycosyltransferase activity
GO:0016757
glycosyltransferase activity
GO:0035251
UDP-glucosyltransferase activity
GO:0052639
salicylic acid glucosyltransferase (ester-forming) activity
GO:0052640
salicylic acid glucosyltransferase (glucoside-forming) activity
GO:0052641
benzoic acid glucosyltransferase activity
GO:0080002
UDP-glucose:4-aminobenzoate acylglucosyltransferase activity
GO:0090704
nicotinate-O-glucosyltransferase activity
Biological Process
GO:0009696
salicylic acid metabolic process
GO:0010030
positive regulation of seed germination
GO:0018874
benzoate metabolic process
GO:0046482
para-aminobenzoic acid metabolic process
Cellular Component
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5u6n
,
PDBe:5u6n
,
PDBj:5u6n
PDBsum
5u6n
PubMed
28425481
UniProt
O22822
|U74F2_ARATH UDP-glycosyltransferase 74F2 (Gene Name=UGT74F2)
[
Back to BioLiP
]