Structure of PDB 5thw Chain B Binding Site BS01

Receptor Information

>5thw Chain B (length=412) Species: 395019 (Burkholderia multivorans ATCC 17616) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

PSIKVDGKRLWNSLMEMAKIGATPKGGVCRLALTDLDKAGRDLIVRWAKE
AGCTVTVDTMGNVFMRRAGRVADAAPVVTGSHADSQPTGGRFDGIYGVLG
GLEVIRSLNDHGIETEHPIEVVIWTNEEGSRFAPAMVASGVFAGVFTLEY
GLSRKDVDGKTIGEELQRIGYAGDVPCGGRPLHAAFELHIEQGPILEAER
KTIGVVTDAQGQRWYEITFTGQEAHAGPTPMPRRRDALLGASRVVDLVNR
IGLDHAPFGCATVGMMQVHPNSRNVIPGRVFFTVDFRHPDDAVLAQMDAA
LRDGVARIAADIGLETALEQIFYYKPVAFDPACVQAVREAAERFGYPHRD
IVSGAGHDACYLAQVAPTSMVFVPCVDGISHNEVEDATPEWIEAGANVLL
HAMLSRACEPVS

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

5thw Chain B Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5thw Crystal structure of Amidase, hydantoinase/carbamoylase family from Burkholderia multivorans
Resolution	2.5 Å
Binding residue (original residue number in PDB)	H96 D107 H203
Binding residue (residue number reindexed from 1)	H82 D93 H189
Annotation score	1

Enzymatic activity

Enzyme Commision number

3.5.1.87: N-carbamoyl-L-amino-acid hydrolase.

Gene Ontology

	Molecular Function
GO:0016787	hydrolase activity
GO:0016813	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
GO:0046872	metal ion binding
GO:0050538	N-carbamoyl-L-amino-acid hydrolase activity

View graph for
Molecular Function

External links

PDB	RCSB:5thw, PDBe:5thw, PDBj:5thw
PDBsum	5thw
PubMed
UniProt	A0A0H3KRF1

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