Structure of PDB 5str Chain B Binding Site BS01
Receptor Information
>5str Chain B (length=300) Species:
559292
(Saccharomyces cerevisiae S288C) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MNTVPFTSAPIEVTIGIDQYSFNVKENQPFHGIKDIPIGHVHVIHFQHAD
NSSMRYGYWFDCRMGNFYIQYDPKDGLYKMMEERDGAKFENIVHNFKERQ
MMVSYPKIDEDDTWYNLTEFVQMDKIRKIVRKDENQFSYVDSSMTTVQEN
ELSDPAHSLNYTVINFKSREAIRPGHEMEDFLDKSYYLNTVMLQGIFKNS
SNYFGELQFAFLNAMFFGNYGSSLQWHAMIELICSSATVPKHMLDKLDEI
LYYQIKTLPEQYSDILLNERVWNICLYSSFQKNSLHNTEKIMENKYPELL
Ligand information
Ligand ID
VNU
InChI
InChI=1S/C12H16N2O/c13-9-11(15)14-12(7-4-8-12)10-5-2-1-3-6-10/h1-3,5-6H,4,7-9,13H2,(H,14,15)
InChIKey
NFWJLHQGYPHNHW-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
c1ccc(cc1)C2(CCC2)NC(=O)CN
ACDLabs 12.01
O=C(NC1(CCC1)c1ccccc1)CN
CACTVS 3.385
NCC(=O)NC1(CCC1)c2ccccc2
Formula
C12 H16 N2 O
Name
N-(1-phenylcyclobutyl)glycinamide
ChEMBL
DrugBank
ZINC
PDB chain
5str Chain B Residue 401 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5str
Large-Scale Crystallographic Fragment Screening Expedites Compound Optimization and Identifies Putative Protein-Protein Interaction Sites.
Resolution
1.45 Å
Binding residue
(original residue number in PDB)
G235 Y237 I282 L283
Binding residue
(residue number reindexed from 1)
G218 Y220 I265 L266
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:5str
,
PDBe:5str
,
PDBj:5str
PDBsum
5str
PubMed
36260741
UniProt
P32357
|AAR2_YEAST A1 cistron-splicing factor AAR2 (Gene Name=AAR2)
[
Back to BioLiP
]