Structure of PDB 5snh Chain B Binding Site BS01
Receptor Information
>5snh Chain B (length=412) Species:
287
(Pseudomonas aeruginosa) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SRRRVVITGMGMLSPLGLDVPSSWEGILAGRSGIAPIEHMDLSAYSTRFG
GSVKGFNVEEYLSAKEARKLDLFIQYGLAASFQAVRDSGLEVTDANRERI
GVSMGSGIGGLTNIENNCRSLFEQGPRRISPFFVPGSIINMVSGFLSIHL
GLQGPNYALTTAQTTGTHSIGMAARNIAYGEADVMVAGGSEMAACGLGLG
GFGAARALSTRNDEPTRASRPWDRDRDGFVLSDGSGALVLEELEHARARG
ARIYAELVGFGMSGDAFHMTAPPEDGAGAARCMKNALRDAGLDPRQVDYI
NAHGTSTPAGDIAEIAAVKSVFGEHAHALSMSSTKSMTGHLLGAAGAVEA
IFSVLALRDQVAPPTINLDNPDEGCDLDLVAHEAKPRKIDVALSNSFGFG
GTNGTLVFRRFA
Ligand information
Ligand ID
O1M
InChI
InChI=1S/C11H14FN3O/c12-9-1-3-10(4-2-9)14-5-7-15(8-6-14)11(13)16/h1-4H,5-8H2,(H2,13,16)
InChIKey
XARVCWHXIZRCGB-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
N2(C(N)=O)CCN(c1ccc(cc1)F)CC2
OpenEye OEToolkits 2.0.6
c1cc(ccc1N2CCN(CC2)C(=O)N)F
CACTVS 3.385
NC(=O)N1CCN(CC1)c2ccc(F)cc2
Formula
C11 H14 F N3 O
Name
4-(4-fluorophenyl)piperazine-1-carboxamide
ChEMBL
DrugBank
ZINC
ZINC000000386756
PDB chain
5snh Chain A Residue 501 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5snh
PanDDA analysis group deposition
Resolution
1.95 Å
Binding residue
(original residue number in PDB)
P132 F133 P136
Binding residue
(residue number reindexed from 1)
P131 F132 P135
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.3.1.179
: beta-ketoacyl-[acyl-carrier-protein] synthase II.
Gene Ontology
Molecular Function
GO:0004315
3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0016746
acyltransferase activity
GO:0016747
acyltransferase activity, transferring groups other than amino-acyl groups
GO:0046872
metal ion binding
Biological Process
GO:0006633
fatty acid biosynthetic process
Cellular Component
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5snh
,
PDBe:5snh
,
PDBj:5snh
PDBsum
5snh
PubMed
UniProt
G3XDA2
[
Back to BioLiP
]