Structure of PDB 5ogt Chain B Binding Site BS01
Receptor Information
>5ogt Chain B (length=348) Species:
743525
(Thermus scotoductus SA-01) [
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ALLFTPLELGGLRLKNRLAMSPMDQYSATLEGEVTDWHLLHYPTRALGGV
GLILVEATAVEPLGRTSPYDLGIWSEDHLPGLKELARRIREAGAVPGIQL
HHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERIL
QAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENR
MRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKEL
GVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPE
QAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALGVAPEVPPQYQRGF
Ligand information
Ligand ID
FMN
InChI
InChI=1S/C17H21N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,22-24H,5-6H2,1-2H3,(H,20,25,26)(H2,27,28,29)/t11-,12+,14-/m0/s1
InChIKey
FVTCRASFADXXNN-SCRDCRAPSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(COP(=O)(O)O)O)O)O
OpenEye OEToolkits 1.7.6
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O
ACDLabs 12.01
N=2C(=O)NC(=O)C3=Nc1cc(C)c(C)cc1N(C=23)CC(O)C(O)C(O)COP(=O)(O)O
CACTVS 3.385
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O)c2cc1C
CACTVS 3.385
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O)c2cc1C
Formula
C17 H21 N4 O9 P
Name
FLAVIN MONONUCLEOTIDE;
RIBOFLAVIN MONOPHOSPHATE
ChEMBL
CHEMBL1201794
DrugBank
DB03247
ZINC
ZINC000003831425
PDB chain
5ogt Chain B Residue 1001 [
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Receptor-Ligand Complex Structure
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PDB
5ogt
Thermus scotoductus SA-01 Ene-reductase triple mutant TsER_C25D_I67T_A102H
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
S22 P23 M24 D25 A58 Q100 H172 H175 R225 V294 L296 G318 R319
Binding residue
(residue number reindexed from 1)
S21 P22 M23 D24 A57 Q99 H171 H174 R224 V293 L295 G317 R318
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
D25 H172 H175 Y177 R225 E233
Catalytic site (residue number reindexed from 1)
D24 H171 H174 Y176 R224 E232
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0003959
NADPH dehydrogenase activity
GO:0010181
FMN binding
GO:0016491
oxidoreductase activity
GO:0050661
NADP binding
View graph for
Molecular Function
External links
PDB
RCSB:5ogt
,
PDBe:5ogt
,
PDBj:5ogt
PDBsum
5ogt
PubMed
UniProt
E8PRF1
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