Structure of PDB 5o1l Chain B Binding Site BS01

Receptor Information
>5o1l Chain B (length=373) Species: 256642 (Streptomyces sp. K30) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RPLWTWSPSASVAGTGVGVDPEYVWDEEADPVLAAVIDRGEVPAVNALLK
QWTRNDQALPGGLPGDLREFMEHARRMPSWADKAALDRGAQFSKTKGIYV
GALYGLGSGLMSTAIPRESRAVYYSKGGADMKDRIAKTARLGYDIGDLDA
YLPHGSMIVTAVKTRMVHAAVRHLLPQSPAWSQTSGGQKIPISQADIMVT
WHSLATFVMRKMKQWGVRVNTADAEAYLHVWQVSAHMLGVSDEYIPATWD
AANAQSKQVLDPILAHTPEGEALTEVLLGIVAELDAGLTRPLIGAFSRYT
LGGEVGDMIGLAKQPVLERLIATAWPLLVAFREGLIPLPAVPAVLWTLEE
ALRKFVLLFLSEGRRIAIDIPDV
Ligand information
Ligand IDHEM
InChIInChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKeyKABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
FormulaC34 H32 Fe N4 O4
NamePROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBankDB18267
ZINC
PDB chain5o1l Chain B Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5o1l Structural and Functional Analysis of Latex Clearing Protein (Lcp) Provides Insight into the Enzymatic Cleavage of Rubber.
Resolution1.48 Å
Binding residue
(original residue number in PDB)		R147 E148 A151 S155 R164 K167 L171 T194 V197 H198 I222 D226 I227 T230
Binding residue
(residue number reindexed from 1)		R117 E118 A121 S125 R134 K137 L141 T164 V167 H168 I192 D196 I197 T200
Annotation score4
Enzymatic activity
Enzyme Commision number 1.13.-.-
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity

View graph for
Molecular Function
External links
PDB RCSB:5o1l, PDBe:5o1l, PDBj:5o1l
PDBsum5o1l
PubMed28733658
UniProtQ3L8N0|LCP_STRK3 Rubber oxygenase (Gene Name=lcp)

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