Structure of PDB 5nlm Chain B Binding Site BS01
Receptor Information
>5nlm Chain B (length=448) Species:
96455
(Persicaria tinctoria) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PTTAPPPHVIIVPSAGMGHLIPLAEFAKRLLPRFTFTFAVPTSGPPSSSQ
RDFLSSLPASIDTSFLPEVDLSDAPSDAQIETLMSLMVVRSLPSLRDLIA
SYSASGRRVAALVVDLFATDAIDVALELGIRPFIFFPSTAMTLSFFLHLE
KLDETVSCEFAEPVQIPGCIPVHGKDLIDPVQDRKNDAYKWLLHHSKRYK
LAEGVIVNSFEGLEGGPIRELLHPEPGKPRVYPVGPLIQAARPECLKWLD
QQPRGSVLFVNFGSGGVLSTEQQNELAGVLAHSQQRFLWVVRPPNDGIAN
DPLKLLPEGFLEQTAGRGLVLPMWAPQIDVLSHESTGGFLTHCGWNSTLE
SVFHGVPLITWPLYAEQKMNAVMLTEGLRVGLRPSVGKDGIIRGAEIARV
IGELMEGEEGKRIRSKMQELKRAASAVLSKDGSSTRALEEVAKIWESK
Ligand information
Ligand ID
IOS
InChI
InChI=1S/C8H7NO4S/c10-14(11,12)13-8-5-9-7-4-2-1-3-6(7)8/h1-5,9H,(H,10,11,12)
InChIKey
BXFFHSIDQOFMLE-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=S(=O)(O)Oc2c1ccccc1nc2
OpenEye OEToolkits 1.5.0
c1ccc2c(c1)c(c[nH]2)OS(=O)(=O)O
CACTVS 3.341
O[S](=O)(=O)Oc1c[nH]c2ccccc12
Formula
C8 H7 N O4 S
Name
3-SULFOOXY-1H-INDOLE
ChEMBL
CHEMBL1233636
DrugBank
DB07992
ZINC
ZINC000001997119
PDB chain
5nlm Chain B Residue 1000 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5nlm
Employing a biochemical protecting group for a sustainable indigo dyeing strategy.
Resolution
2.14 Å
Binding residue
(original residue number in PDB)
E88 L123 F124
Binding residue
(residue number reindexed from 1)
E81 L116 F117
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.4.1.-
Gene Ontology
Molecular Function
GO:0008194
UDP-glycosyltransferase activity
GO:0016757
glycosyltransferase activity
GO:0046872
metal ion binding
View graph for
Molecular Function
External links
PDB
RCSB:5nlm
,
PDBe:5nlm
,
PDBj:5nlm
PDBsum
5nlm
PubMed
29309053
UniProt
A0A2R2JFJ4
[
Back to BioLiP
]