Structure of PDB 5nl0 Chain B Binding Site BS01

Receptor Information
>5nl0 Chain B (length=83) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDA
VTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Ligand information
>5nl0 Chain I (length=193) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
tacgtaatattggccagctaggatatcacaatcccggtgccgaggccgct
caattggtcgtagacagctctagcaccgcttaaacgcacgtacggaatcc
gtacgtgcgtttaagcggtgctagagctgtctacgaccaattgagcggcc
tcggcaccgggattgtgatatcctagctggccaatattacgta
Receptor-Ligand Complex Structure
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PDB5nl0 Structure and Dynamics of a 197 bp Nucleosome in Complex with Linker Histone H1.
Resolution5.4 Å
Binding residue
(original residue number in PDB)
R36 R45
Binding residue
(residue number reindexed from 1)
R17 R26
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006334 nucleosome assembly
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function

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Cellular Component
External links
PDB RCSB:5nl0, PDBe:5nl0, PDBj:5nl0
PDBsum5nl0
PubMed28475873
UniProtP62799|H4_XENLA Histone H4

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