Structure of PDB 5n9f Chain B Binding Site BS01

Receptor Information
>5n9f Chain B (length=855) Species: 7227 (Drosophila melanogaster) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IRLGCNVSAPSGVLERVKELMEDYSRAPDAKFQQQFRHLLSVNFEEFVAE
TKERNADLDWVNPKLDERLQLELGQRQLEENAKKRLEARKKLPTMKYADD
IIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPR
RISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQ
QLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSA
TVREQDFCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKTNYEFQKRMKHEA
MIEPYLRRIRNSYDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGA
ILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAV
FRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSL
DEVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKL
ESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTL
TPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLG
KESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERDFCYKNFLSS
MTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAG
LYPNMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVNSGESGFDSAY
FVYFQRQKSTDLFLLDSTMVFPMALIIFGDGVEAGVTQNTPYLCVAKTYY
FKCNRETADVVIQLRSNLEKLLLKKALYPAPIEENGYEKQLIKAIELLLS
LDERL
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5n9f Structural and mechanistic insights into DHX36-mediated innate immunity and G-quadruplex unfolding
Resolution2.969 Å
Binding residue
(original residue number in PDB)		R211 R212 R239 T255 G257 Q261 S265 G431 Y432 H463 S464 T489 I490 I491 S495 K511 T513 P635 I636 D637 D680 R793 H809 P810 S811 S833 T834
Binding residue
(residue number reindexed from 1)		R150 R151 R178 T194 G196 Q200 S204 G357 Y358 H389 S390 T415 I416 I417 S421 K437 T439 P561 I562 D563 D606 R719 H735 P736 S737 S759 T760
Enzymatic activity
Enzyme Commision number 3.6.4.13: RNA helicase.
Gene Ontology
Molecular Function
GO:0002151 G-quadruplex RNA binding
GO:0003676 nucleic acid binding
GO:0003678 DNA helicase activity
GO:0003723 RNA binding
GO:0003724 RNA helicase activity
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0051880 G-quadruplex DNA binding
Biological Process
GO:0032508 DNA duplex unwinding
GO:0044806 G-quadruplex DNA unwinding
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5n9f, PDBe:5n9f, PDBj:5n9f
PDBsum5n9f
PubMed
UniProtQ8SWT2

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