Structure of PDB 5m5u Chain B Binding Site BS01

Receptor Information
>5m5u Chain B (length=360) Species: 9913 (Bos taurus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVII
DMNDPSNPIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT
MTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQI
INYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQ
FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP
PEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETI
FVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAV
RNNLAGAEEL
Ligand information
>5m5u Chain F (length=7) Species: 10423 (Hepatitis delta virus (ISOLATE ITALIAN)) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
SDILFPA
Receptor-Ligand Complex Structure
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PDB5m5u Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Resolution2.15 Å
Binding residue
(original residue number in PDB)		R64 P65 I66 S67 L82 Q89 F91 K98
Binding residue
(residue number reindexed from 1)		R61 P62 I63 S64 L79 Q86 F88 K95
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0006886 intracellular protein transport
GO:0016192 vesicle-mediated transport
Cellular Component
GO:0030130 clathrin coat of trans-Golgi network vesicle
GO:0030132 clathrin coat of coated pit

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5m5u, PDBe:5m5u, PDBj:5m5u
PDBsum5m5u
PubMed27813245
UniProtP49951|CLH1_BOVIN Clathrin heavy chain 1 (Gene Name=CLTC)

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