Structure of PDB 5m1n Chain B Binding Site BS01

Receptor Information
>5m1n Chain B (length=189) Species: 1406341 (Thermus phage G20c) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PAMNSVFSGLDMLILLPYERRGTRLVVEDYRPDHIYCIGADFGKNQDYSV
FSVLDLDTGAIACLERMNGATWSDQVARLKALSEDYGHAYVVADTWGVGD
AIAEELDAQGINYTPLPVKSSSVKEQLISNLALLMEKGQVAVPNDKTILD
ELRNFRYYRTASGNQVMRAYGRGHDDIVMSLALAYSQYE
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain5m1n Chain B Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5m1n Viral genome packaging terminase cleaves DNA using the canonical RuvC-like two-metal catalysis mechanism.
Resolution1.2 Å
Binding residue
(original residue number in PDB)		D294 D429
Binding residue
(residue number reindexed from 1)		D41 D176
Annotation score4
Enzymatic activity
Enzyme Commision number 3.1.21.-
3.6.4.-
External links
PDB RCSB:5m1n, PDBe:5m1n, PDBj:5m1n
PDBsum5m1n
PubMed28100693
UniProtA0A1L4BKS3|TERL_BPG20 Terminase, large subunit (Gene Name=G20c_80)

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