Structure of PDB 5m0p Chain B Binding Site BS01
Receptor Information
>5m0p Chain B (length=421) Species:
946435
(Jeotgalicoccus sp. ATCC 8456) [
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ATLKRDKGLDNTLKVLKQGYLYTTNQRNRLNTSVFQTKALGGKPFVVVTG
KEGAEMFYNNDVVQREGMLPKRIVNTLAGKGAIHTVDGKKHVDRKALFMS
LMTEGNLNYVRELTRTLWHANTQRMESMDEVNIYRESIVLLTKVGTRWAG
VQAPPEDIERIATDMDIMIDSFRALGGAFKGYKASKEARRRVEDWLEEQI
IETRKGNIHPPEGTALYEFAHWEDYLGNPMDSRTCAIDLMNTFRPLIAIN
RFVSFGLHAMNENPITREKIKSEPDYAYKFAQEVRRYYPFVPFLPGKAKV
DIDFQGVTIPAGVGLALDVYGTTHDESLWDDPNEFRPERFETWDGSPFDL
IPQGGGDYWTNHRCAGEWITVIIMEETMKYFAEKITYDVPEQDLEVDLNS
IPGYVKSGFVIKNVREVVDRT
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
5m0p Chain B Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
5m0p
Catalytic Determinants of Alkene Production by the Cytochrome P450 Peroxygenase OleTJE.
Resolution
1.95 Å
Binding residue
(original residue number in PDB)
Y59 R66 H85 H92 K96 F99 T243 P246 L247 F253 F291 V292 L295 Q354 H363 C365 G367 T371
Binding residue
(residue number reindexed from 1)
Y58 R65 H84 H91 K95 F98 T242 P245 L246 F252 F290 V291 L294 Q353 H362 C364 G366 T370
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004497
monooxygenase activity
GO:0005506
iron ion binding
GO:0016491
oxidoreductase activity
GO:0016705
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0016125
sterol metabolic process
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:5m0p
,
PDBe:5m0p
,
PDBj:5m0p
PDBsum
5m0p
PubMed
28053093
UniProt
E9NSU2
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