Structure of PDB 5lsf Chain B Binding Site BS01

Receptor Information
>5lsf Chain B (length=239) Species: 89463 (Sacbrood virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EVPSKESIQGDATQQSSKEENTIITRDQQQTVSENIPSTVGDLVIASSEP
TQQFRSLTNRWMPINSIRVTVNGKRNDLLAQYYIPEDFLSTHAKCAPNTI
PFETYVYGKYELEMKFVANGNKFQCGKVIISVKFDSYQADNINTGFQAAL
SRPHIMLDLSTNNEGVLKIPFRYHRAFVRNQTHKTATAGVRPGKFASIYV
QVLSPLQTGEGGANDMFIRPFYRYTRAEFAGMSYKVPLT
Ligand information
>5lsf Chain D (length=26) Species: 89463 (Sacbrood virus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
DNPHRFLPANVSNRWNEYSSAYLPRV
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5lsf Virion structure and genome delivery mechanism of sacbrood honeybee virus.
Resolution2.1 Å
Binding residue
(original residue number in PDB)		L80 Q83 Y85 D89 Y139 Q140 D142 N143 T146 R193 P194 K196 Y201
Binding residue
(residue number reindexed from 1)		L78 Q81 Y83 D87 Y137 Q138 D140 N141 T144 R191 P192 K194 Y199
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity

View graph for
Molecular Function
External links
PDB RCSB:5lsf, PDBe:5lsf, PDBj:5lsf
PDBsum5lsf
PubMed29987012
UniProtA0A2S0CUG6

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