Structure of PDB 5ksb Chain B Binding Site BS01

Receptor Information
>5ksb Chain B (length=179) Species: 4565,9606 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DSPEDFVYQFKGMCYFTNGTERVRLVTRYIYNREEYARFDSDVGVYRAVT
PLGPPAAEYWNSQKEVLERTRAELDTVCRHNYQLELRTTLQRRVEPTVTI
SPLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLIRNGDWTFQILVML
EMTPQRGDVYTCHVEHPSLQNPIIVEWRA
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5ksb Diverse T Cell Receptor Gene Usage in HLA-DQ8-Associated Celiac Disease Converges into a Consensus Binding Solution.
Resolution2.9 Å
Binding residue
(original residue number in PDB)		F11 Y30 Y37 A57 W61 V67 R70 E74 T77 V78 H81 N82 L85
Binding residue
(residue number reindexed from 1)		F10 Y29 Y36 A56 W60 V66 R69 E73 T76 V77 H80 N81 L84
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006955 immune response
GO:0019882 antigen processing and presentation
Cellular Component
GO:0016020 membrane
GO:0042613 MHC class II protein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:5ksb, PDBe:5ksb, PDBj:5ksb
PDBsum5ksb
PubMed27568928
UniProtA0A0U5Q247;
P08079

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