Structure of PDB 5j8u Chain B Binding Site BS01
Receptor Information
>5j8u Chain B (length=207) Species:
9606
(Homo sapiens) [
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VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTD
PSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNAGTIAKSGTK
AFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSA
GGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGY
PITLFVE
Ligand information
Ligand ID
6DL
InChI
InChI=1S/C14H9BrFN3O3/c15-8-5-7(11(20)6-12(8)21)13-17-18-14(22)19(13)10-4-2-1-3-9(10)16/h1-6,20-21H,(H,18,22)
InChIKey
WTHWBOWCSOCLLT-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.5
c1ccc(c(c1)N2C(=NNC2=O)c3cc(c(cc3O)O)Br)F
CACTVS 3.385
Oc1cc(O)c(cc1Br)C2=NNC(=O)N2c3ccccc3F
Formula
C14 H9 Br F N3 O3
Name
5-(5-Bromo-2,4-dihydroxy-phenyl)-4-(2-fluoro-phenyl)-2,4-dihydro-[1,2,4]triazol-3-one
ChEMBL
CHEMBL3898029
DrugBank
ZINC
PDB chain
5j8u Chain B Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
5j8u
Protein conformational flexibility modulates kinetics and thermodynamics of drug binding.
Resolution
1.75 Å
Binding residue
(original residue number in PDB)
N51 A55 K58 D93 I96 G97 M98 T184
Binding residue
(residue number reindexed from 1)
N35 A39 K42 D77 I80 G81 M82 T168
Annotation score
1
Binding affinity
MOAD
: Kd=0.000000064M
PDBbind-CN
: -logKd/Ki=6.47,Kd=340nM
Enzymatic activity
Enzyme Commision number
3.6.4.10
: non-chaperonin molecular chaperone ATPase.
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
GO:0051082
unfolded protein binding
GO:0140662
ATP-dependent protein folding chaperone
Biological Process
GO:0006457
protein folding
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5j8u
,
PDBe:5j8u
,
PDBj:5j8u
PDBsum
5j8u
PubMed
29273709
UniProt
P07900
|HS90A_HUMAN Heat shock protein HSP 90-alpha (Gene Name=HSP90AA1)
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