Structure of PDB 5j7b Chain B Binding Site BS01
Receptor Information
>5j7b Chain B (length=281) Species:
9606
(Homo sapiens) [
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EAICSALPTIPYHKLADLRYLSRGASGTVSSARHADWRVQVAVKHLSERK
DVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKT
EYPDVAWPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVK
IADFGLEGGTIIYMPPENYEPGQKSRASIKHDIYSYAVITWEVLSRKQPF
EDVTNPLQIMYSVSQGHRPVINEESLPYDIPHRARMISLIESGWAQNPDE
RPSFLKCLIELEPVLRTFEEITFLEAVIQLK
Ligand information
Ligand ID
6GD
InChI
InChI=1S/C20H19FN4O2S/c1-20(2,3)28(26,27)13-5-7-16-14(11-13)17(8-9-22-16)23-19-15-10-12(21)4-6-18(15)24-25-19/h4-11H,1-3H3,(H2,22,23,24,25)
InChIKey
XLOGLWKOHPIJLV-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
c3cc(cc4c(Nc1c2c(nn1)ccc(F)c2)ccnc34)S(C(C)(C)C)(=O)=O
OpenEye OEToolkits 2.0.4
CC(C)(C)S(=O)(=O)c1ccc2c(c1)c(ccn2)Nc3c4cc(ccc4n[nH]3)F
CACTVS 3.385
CC(C)(C)[S](=O)(=O)c1ccc2nccc(Nc3[nH]nc4ccc(F)cc34)c2c1
Formula
C20 H19 F N4 O2 S
Name
6-(tert-butylsulfonyl)-N-(5-fluoro-2H-indazol-3-yl)quinolin-4-amine
ChEMBL
CHEMBL3823499
DrugBank
ZINC
ZINC000140121291
PDB chain
5j7b Chain B Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
5j7b
The Identification and Pharmacological Characterization of 6-(tert-Butylsulfonyl)-N-(5-fluoro-1H-indazol-3-yl)quinolin-4-amine (GSK583), a Highly Potent and Selective Inhibitor of RIP2 Kinase.
Resolution
2.53 Å
Binding residue
(original residue number in PDB)
S25 A45 K47 L79 T95 M98 G101 L153 A163 D164
Binding residue
(residue number reindexed from 1)
S22 A42 K44 L68 T84 M87 G90 L142 A152 D153
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
D146 K148 Q150 N151 D164 T189
Catalytic site (residue number reindexed from 1)
D135 K137 Q139 N140 D153 T160
Enzyme Commision number
2.7.10.2
: non-specific protein-tyrosine kinase.
2.7.11.1
: non-specific serine/threonine protein kinase.
Gene Ontology
Molecular Function
GO:0004672
protein kinase activity
GO:0005524
ATP binding
Biological Process
GO:0006468
protein phosphorylation
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5j7b
,
PDBe:5j7b
,
PDBj:5j7b
PDBsum
5j7b
PubMed
27109867
UniProt
O43353
|RIPK2_HUMAN Receptor-interacting serine/threonine-protein kinase 2 (Gene Name=RIPK2)
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