Structure of PDB 5ir1 Chain B Binding Site BS01

Receptor Information

>5ir1 Chain B (length=220) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGV
IWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALT
YYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKD
YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTY
ICNVNHKPSNTKVDKRVEPK

Ligand information

>5ir1 Chain E (length=12) Species: 32630 (synthetic construct) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

GQFDLSTRRLKG

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5ir1 Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes.
Resolution	2.482 Å
Binding residue (original residue number in PDB)	Q39 P41 I92 Q111 L114 A174
Binding residue (residue number reindexed from 1)	Q39 P41 I92 Q111 L114 A174

External links

PDB	RCSB:5ir1, PDBe:5ir1, PDBj:5ir1
PDBsum	5ir1
PubMed	27834791

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