Structure of PDB 5ip3 Chain B Binding Site BS01

Receptor Information
>5ip3 Chain B (length=246) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VKLTKENIVALLTQGKDLEFENLVAFNFKTFCLENLDQIKKMSIISCLTF
LKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRLVE
ETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASV
DSFEMISVVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNE
DQVKKGKEYAAILSSSNPNAKGSVAMEHYSETLNKFYEMFGVKKQA
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5ip3 Asymmetric Trimeric Ring Structure of the Nucleocapsid Protein of Tospovirus.
Resolution3.0 Å
Binding residue
(original residue number in PDB)
V30 F32 M64 K68 I86 T92 F93 R94 R95 L152 Y184 K192
Binding residue
(residue number reindexed from 1)
V24 F26 M58 K62 I80 T86 F87 R88 R89 L146 Y178 K186
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019028 viral capsid
GO:1990904 ribonucleoprotein complex

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Molecular Function

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Cellular Component
External links
PDB RCSB:5ip3, PDBe:5ip3, PDBj:5ip3
PDBsum5ip3
PubMed28768868
UniProtF4ZD19

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