Structure of PDB 5ip3 Chain B Binding Site BS01
Receptor Information
>5ip3 Chain B (length=246) [
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VKLTKENIVALLTQGKDLEFENLVAFNFKTFCLENLDQIKKMSIISCLTF
LKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRLVE
ETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASV
DSFEMISVVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNE
DQVKKGKEYAAILSSSNPNAKGSVAMEHYSETLNKFYEMFGVKKQA
Ligand information
>5ip3 Chain D (length=5) [
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Receptor-Ligand Complex Structure
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PDB
5ip3
Asymmetric Trimeric Ring Structure of the Nucleocapsid Protein of Tospovirus.
Resolution
3.0 Å
Binding residue
(original residue number in PDB)
V30 F32 M64 K68 I86 T92 F93 R94 R95 L152 Y184 K192
Binding residue
(residue number reindexed from 1)
V24 F26 M58 K62 I80 T86 F87 R88 R89 L146 Y178 K186
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
Cellular Component
GO:0019013
viral nucleocapsid
GO:0019028
viral capsid
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Cellular Component
External links
PDB
RCSB:5ip3
,
PDBe:5ip3
,
PDBj:5ip3
PDBsum
5ip3
PubMed
28768868
UniProt
F4ZD19
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