Structure of PDB 5gip Chain B Binding Site BS01

Receptor Information
>5gip Chain B (length=375) Species: 2287 (Saccharolobus solfataricus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KIYLIEHVIGAVAYDENGNIVDYITNPRDLGKITEELLNNEKGIPFSATV
ELLKKVNPQEVVVENEAEVPKLQALGYRVSYEPYSKVSRIFRESLPKVAI
DIKFASNEEDYYNFLHELSLEYTRRKLRSAAQKRDLLAIQAVRAMDDIDK
TINLFSERLREWYSIHFPELDKLIEDHEEYATIVSRFGDRGFLTIDSLKE
LGFNEQRINRILDAAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNN
YLEGVMKEVAPNVTALVGPALGARLLSIAGSLDELAKMPASTIQVLGAEK
ALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAKLAIAARVD
AFSGRFIGDQLNEQLKKRIDEIKEK
Ligand information
>5gip Chain G (length=31) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ucuugugaugagaacacucauggucugaaga
...............................
Receptor-Ligand Complex Structure
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PDB5gip Box C/D guide RNAs recognize a maximum of 10 nt of substrates
Resolution3.129 Å
Binding residue
(original residue number in PDB)		K152 E159 R160 E163 G299 A300 K302 A303 R313 P314 P315 K316 H317 G318 F321 G335 K336 R339 A343 K344 R370
Binding residue
(residue number reindexed from 1)		K150 E157 R158 E161 G297 A298 K300 A301 R311 P312 P313 K314 H315 G316 F319 G333 K334 R337 A341 K342 R368
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0030515 snoRNA binding
Cellular Component
GO:0031428 box C/D methylation guide snoRNP complex
GO:0032040 small-subunit processome

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Molecular Function
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Cellular Component
External links
PDB RCSB:5gip, PDBe:5gip, PDBj:5gip
PDBsum5gip
PubMed27625427
UniProtQ97ZH3

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