Structure of PDB 5fml Chain B Binding Site BS01

Receptor Information
>5fml Chain B (length=196) Species: 11520 (Influenza B virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MAMDTFITRNFQTTIIQKAKNTMAEFSEDPELQPAMLFNICVHLEVCYVI
SDMNFLDEEGKSYTALEGQGKEQNLRPQYEVIEGMPRTIAWMVQRSLAQE
HGIETPKYLADLFDYKTKRFIEVGITKGLADDYFWKKKEKLGNSMELMIF
SYNQDYSLSNESSLDEEGKGRVLSRLTELQAELSLKNLWQVLIGEE
Ligand information
>5fml Chain A (length=19) Species: 11520 (Influenza B virus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
LSNDISQGIKRQRMTVESM
Receptor-Ligand Complex Structure
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PDB5fml Influenza Polymerase Can Adopt an Alternative Configuration Involving a Radical Repacking of Pb2 Domains.
Resolution1.7 Å
Binding residue
(original residue number in PDB)
Q10 I13 E43 Y46 V47 D50 F53 P75 E78 V79 M83 S94 R169
Binding residue
(residue number reindexed from 1)
Q12 I15 E45 Y48 V49 D52 F55 P77 E80 V81 M85 S96 R171
Enzymatic activity
Enzyme Commision number 3.1.-.-
Gene Ontology
Biological Process
GO:0039694 viral RNA genome replication

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Molecular Function

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Biological Process
External links
PDB RCSB:5fml, PDBe:5fml, PDBj:5fml
PDBsum5fml
PubMed26711008
UniProtQ5V8Z9

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